Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
nkiras1NFKB inhibitor interacting Ras-like 1. (192 aa)    
Predicted Functional Partners:
ralgapb
Ral GTPase activating protein, beta subunit (non-catalytic).
    
   0.760
LOC101073957
DnaJ (Hsp40) homolog, subfamily C, member 11a.
    
   0.735
ttc7b
Tetratricopeptide repeat domain 7B.
      
 0.726
ralgapa1
Ral GTPase activating protein, alpha subunit 1 (catalytic).
    
 
 0.709
ralgapa2
Ral GTPase activating protein, alpha subunit 2 (catalytic).
    
 
 0.709
LOC101071723
Testis expressed 2.
      
 0.668
TEX2
SMP-LTD domain-containing protein.
      
 0.668
ranbp1
RAN binding protein 1.
      
 0.642
LOC101079469
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
      
 0.589
LOC101076072
DUF3395 domain-containing protein.
    
   0.585
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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