Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ncdnNeurochondrin. (804 aa)    
Predicted Functional Partners:
eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.855
aar2
AAR2 splicing factor.
    
 
 0.853
ttc27
Tetratricopeptide repeat domain 27.
    
 
 0.835
c21h9orf78
Zgc:103692.
    
   0.782
eapp
E2f-associated phosphoprotein.
    
 
 0.758
ecd
Ecdysoneless homolog (Drosophila).
    
   0.756
LOC101079321
Regulator of G protein signaling 8.
      
 0.751
ppl
Periplakin.
   
  
 0.702
mms19
MMS19 homolog, cytosolic iron-sulfur assembly component.
      
 0.698
ENSTRUP00000018373
Delta/notch-like EGF repeat containing.
      
 0.648
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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