STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
txndc15Thioredoxin domain containing 15. (347 aa)    
Predicted Functional Partners:
tmx1
Thioredoxin-related transmembrane protein 1.
      
 0.557
LOC101067024
Tetratricopeptide repeat domain 23.
      
 0.542
trmt9b
tRNA methyltransferase 9B.
      
 0.497
mfsd6
Major facilitator superfamily domain containing 6a.
      
 0.495
ints10
Integrator complex subunit 10.
      
 0.453
camlg
Calcium signal-modulating cyclophilin ligand; Likely involved in the mobilization of calcium as a result of the TCR/CD3 complex interaction. Binds to cyclophilin B.
   
  
 0.435
ddx46
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.
 
    
 0.410
krtcap2
Keratinocyte associated protein 2.
      
 0.404
slc25a48
Solute carrier family 25 member 48; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.403
lect2
Leukocyte cell-derived chemotaxin 2 like.
      
 0.403
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.