STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101066898Coiled-coil-helix-coiled-coil-helix domain containing 4b. (156 aa)    
Predicted Functional Partners:
gfer
Sulfhydryl oxidase.
    
 0.935
ENSTRUP00000049598
Cytochrome c oxidase copper chaperone COX17.
   
 0.889
timm10
Translocase of inner mitochondrial membrane 10 homolog (yeast).
   
 0.883
timm13
Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family.
   
 0.873
timm9
Translocase of inner mitochondrial membrane 9 homolog.
   
 0.869
aifm1
Apoptosis inducing factor mitochondrion associated 1.
    
 
 0.821
ndufs5
NADH:ubiquinone oxidoreductase subunit S5.
    
 
 0.775
timm8a
Mitochondrial import inner membrane translocase subunit Tim8 A; Mitochondrial intermembrane chaperone that participates in the import and insertion of some multi-pass transmembrane proteins into the mitochondrial inner membrane. Also required for the transfer of beta-barrel precursors from the TOM complex to the sorting and assembly machinery (SAM complex) of the outer membrane. Acts as a chaperone-like protein that protects the hydrophobic precursors from aggregation and guide them through the mitochondrial intermembrane space. The TIMM8- TIMM13 complex mediates the import of some pro [...]
   
 0.725
timm8b
Translocase of inner mitochondrial membrane 8 homolog B (yeast); Belongs to the small Tim family.
   
 0.725
atp23
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
    
 
 0.721
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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