Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101078017Oxysterol-binding protein; Belongs to the OSBP family. (768 aa)    
Predicted Functional Partners:
LOC101078863
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 
 0.728
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 
 0.636
mospd2
Motile sperm domain containing 2.
    
 
 0.573
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
    
 
 0.543
LOC101062942
MSP domain-containing protein.
    
 
 0.534
mospd1
Motile sperm domain containing 1.
    
 
 0.507
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
    
 
 0.482
iars1
Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.480
stard3
StAR-related lipid transfer (START) domain containing 3.
      
 0.448
chaf1b
Chromatin assembly factor 1, subunit B.
      
 0.444
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.