Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2TDZ2_TAKRUGalectin. (214 aa)    
Predicted Functional Partners:
Lgals3bp
Zgc:112492.
    
 
 0.891
LOC101063946
Galectin.
   
 0.859
lgals2
Galectin.
   
 0.810
lamp1
Lysosomal associated membrane protein 1a.
    
 0.752
alox5ap
Arachidonate 5-lipoxygenase-activating protein.
   
  
 0.680
alox5ap-2
Arachidonate 5-lipoxygenase activating protein.
   
  
 0.680
LOC101079175
Galectin.
    
 
 0.596
LOC101073797
Lysosomal associated membrane protein 1b.
    
 0.590
enpp4
Ectonucleotide pyrophosphatase/phosphodiesterase 4.
    
  0.575
cd63
Tetraspanin.
   
 
 0.566
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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