STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmc1COX assembly mitochondrial protein. (106 aa)    
Predicted Functional Partners:
azi2
5-azacytidine induced 2.
      
 0.656
ENSTRUP00000049598
Cytochrome c oxidase copper chaperone COX17.
   
  
 0.635
LOC101063412
Cytochrome C oxidase assembly factor 5.
   
  
 0.595
ccdc12
Coiled-coil domain containing 12.
      
 0.565
atp23
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.565
timm10
Translocase of inner mitochondrial membrane 10 homolog (yeast).
   
  
 0.550
LOC101061764
Cytochrome C oxidase assembly factor 3a.
   
 
 0.513
ndufb7
NADH:ubiquinone oxidoreductase subunit B7.
      
 0.507
LOC101077828
Coiled-coil_56 domain-containing protein.
   
 
 0.462
zfc3h1
zf-C3H1 domain-containing protein.
      
 0.459
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.