Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101067381Ankyrin 3a. (2451 aa)    
Predicted Functional Partners:
ENSTRUP00000083487
Uncharacterized protein.
  
  
 
0.901
sptan1
Uncharacterized protein.
   
 0.755
nfasc
Neurofascin homolog (chicken) a.
   
 0.632
chl1
Cell adhesion molecule L1-like b.
   
 0.632
LOC101067328
Uncharacterized protein.
   
 0.632
LOC101072496
Neuronal cell adhesion molecule a.
   
 0.632
LOC101079354
Uncharacterized protein.
   
 0.632
LOC101065574
Neural cell adhesion molecule L1; Neural cell adhesion molecule involved in the dynamics of cell adhesion and in the generation of transmembrane signals at tyrosine kinase receptors. During brain development, critical in multiple processes, including neuronal migration, axonal growth and fasciculation, and synaptogenesis. In the mature brain, plays a role in the dynamics of neuronal structure and function, including synaptic plasticity.
   
 0.632
LOC101065280
Uncharacterized protein.
   
 0.589
sptbn4
Spectrin beta chain; Belongs to the spectrin family.
   
 0.582
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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