Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101062132Lysyl oxidase-like 5b. (438 aa)    
Predicted Functional Partners:
ENSTRUP00000066035
Elastin-like isoform X1.
   
 0.882
fbln5
Fibulin 5.
   
 0.739
nudcd1
Uncharacterized protein.
    
   0.610
ENSTRUP00000067517
Collagen, type VI, alpha 1.
   
 0.563
LOC101064982
Proopiomelanocortin.
     
 0.556
MFAP2
Microfibril associated protein 2.
   
 
 0.550
serpinh1
Serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b; Belongs to the serpin family.
   
 0.549
gdf15
TGF_BETA_2 domain-containing protein.
    
 0.546
H2V4V2_TAKRU
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
      
 0.496
LOC105416726
Microfibril associated protein 5.
   
 
 0.491
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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