STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcfd2Multiple coagulation factor deficiency 2. (194 aa)    
Predicted Functional Partners:
lman1
Lectin, mannose-binding, 1.
   
 0.996
mrpl45
Mitochondrial ribosomal protein L45.
      
 0.706
f8
Uncharacterized protein; Belongs to the multicopper oxidase family.
     
 0.699
LOC445945
Coagulation factor V; Belongs to the multicopper oxidase family.
     
 0.699
H2V7Q0_TAKRU
SEC24 homolog C, COPII coat complex component.
     
 0.670
wipf2
WAS/WASL interacting protein family, member 2a.
      
 0.650
H2TRS2_TAKRU
Dexi homolog (mouse).
      
 0.646
ctsc
Cathepsin C; Belongs to the peptidase C1 family.
     
 0.643
sec24d
SEC24 homolog D, COPII coat complex component.
     
 0.635
H2TZC2_TAKRU
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.633
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.