Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
senp5ULP_PROTEASE domain-containing protein. (246 aa)    
Predicted Functional Partners:
wdr18
WD repeat domain 18.
    
 0.910
tex10
Testis expressed 10.
   
 0.898
LOC101071127
Proline, glutamate and leucine rich protein 1.
    
 0.867
sumo1
Small ubiquitin-related modifier.
   
 0.863
Crebzf
CREB/ATF bZIP transcription factor.
   
 0.817
las1l
Uncharacterized protein.
   
 0.817
SENP6
Uncharacterized protein.
   
 0.761
nup133
Nucleoporin 133.
   
 
 0.733
sumo2
Small ubiquitin-related modifier.
   
 0.727
LOC101063780
Small ubiquitin-related modifier 3.
   
 0.727
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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