Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dnajc28DnaJ (Hsp40) homolog, subfamily C, member 28. (386 aa)    
Predicted Functional Partners:
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
    
   0.897
atp5f1b
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.808
dnajc9
DnaJ (Hsp40) homolog, subfamily C, member 9.
      
 0.753
dnajc14
DnaJ (Hsp40) homolog, subfamily C, member 14.
      
 0.699
dnajc8
J domain-containing protein.
      
 0.689
dnajc27
DnaJ (Hsp40) homolog, subfamily C, member 27.
      
 0.680
dnajb12
DnaJ heat shock protein family (Hsp40) member B12b.
   
  
 0.669
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
      
 0.669
LOC101073389
DnaJ (Hsp40) homolog, subfamily C, member 18.
   
  
 0.665
dnajc24
Uncharacterized protein.
      
 0.663
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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