GPR37L1 protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GPR37L1

Nucleolar protein 8. (535 aa)

Predicted Functional Partners:

dram2

0.710

LOC105418031

0.577

psap

0.577

LOC101073562

0.530

LOC101071611

0.530

LOC101071691

0.530

LOC101074625

0.530

LOC101064982

0.516

agtr1

0.498

penk

0.465

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GPR37L1	LOC101064982	ENSTRUP00000023157	ENSTRUP00000024484	Nucleolar protein 8.	Proopiomelanocortin.	0.516
GPR37L1	LOC101071611	ENSTRUP00000023157	ENSTRUP00000035481	Nucleolar protein 8.	PPFIA binding protein 1a.	0.530
GPR37L1	LOC101071691	ENSTRUP00000023157	ENSTRUP00000048939	Nucleolar protein 8.	CTTNBP2 N-terminal like a.	0.530
GPR37L1	LOC101073562	ENSTRUP00000023157	ENSTRUP00000004194	Nucleolar protein 8.	Cyclin D2, a; Belongs to the cyclin family.	0.530
GPR37L1	LOC101074625	ENSTRUP00000023157	ENSTRUP00000065007	Nucleolar protein 8.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.530
GPR37L1	LOC105418031	ENSTRUP00000023157	ENSTRUP00000050582	Nucleolar protein 8.	Surfactant protein Bb.	0.577
GPR37L1	agtr1	ENSTRUP00000023157	ENSTRUP00000045514	Nucleolar protein 8.	Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.	0.498
GPR37L1	dram2	ENSTRUP00000023157	ENSTRUP00000019759	Nucleolar protein 8.	DNA-damage regulated autophagy modulator 2b.	0.710
GPR37L1	penk	ENSTRUP00000023157	ENSTRUP00000063061	Nucleolar protein 8.	Proenkephalin a.	0.465
GPR37L1	psap	ENSTRUP00000023157	ENSTRUP00000066557	Nucleolar protein 8.	Prosaposin; Prosaposin: Behaves as a myelinotrophic and neurotrophic factor, these effects are mediated by its G-protein-coupled receptors, GPR37 and GPR37L1, undergoing ligand-mediated internalization followed by ERK phosphorylation signaling.	0.577
LOC101064982	GPR37L1	ENSTRUP00000024484	ENSTRUP00000023157	Proopiomelanocortin.	Nucleolar protein 8.	0.516
LOC101064982	agtr1	ENSTRUP00000024484	ENSTRUP00000045514	Proopiomelanocortin.	Angiotensin II receptor, type 1b; Belongs to the G-protein coupled receptor 1 family.	0.719
LOC101064982	penk	ENSTRUP00000024484	ENSTRUP00000063061	Proopiomelanocortin.	Proenkephalin a.	0.980
LOC101071611	GPR37L1	ENSTRUP00000035481	ENSTRUP00000023157	PPFIA binding protein 1a.	Nucleolar protein 8.	0.530
LOC101071611	LOC101071691	ENSTRUP00000035481	ENSTRUP00000048939	PPFIA binding protein 1a.	CTTNBP2 N-terminal like a.	0.698
LOC101071611	LOC101073562	ENSTRUP00000035481	ENSTRUP00000004194	PPFIA binding protein 1a.	Cyclin D2, a; Belongs to the cyclin family.	0.714
LOC101071611	LOC101074625	ENSTRUP00000035481	ENSTRUP00000065007	PPFIA binding protein 1a.	F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.700
LOC101071611	dram2	ENSTRUP00000035481	ENSTRUP00000019759	PPFIA binding protein 1a.	DNA-damage regulated autophagy modulator 2b.	0.526
LOC101071691	GPR37L1	ENSTRUP00000048939	ENSTRUP00000023157	CTTNBP2 N-terminal like a.	Nucleolar protein 8.	0.530
LOC101071691	LOC101071611	ENSTRUP00000048939	ENSTRUP00000035481	CTTNBP2 N-terminal like a.	PPFIA binding protein 1a.	0.698