Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sugt1SGT1 homolog, MIS12 kinetochore complex assembly cochaperone. (335 aa)    
Predicted Functional Partners:
LOC101076976
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.994
LOC101069079
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 0.994
nod1
Nucleotide-binding oligomerization domain containing 1.
    
 0.968
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 
 0.946
chordc1
Cysteine and histidine-rich domain (CHORD) containing 1b.
   
 
 0.911
LOC101070860
TSC complex subunit 1b.
   
 0.883
H2UCW4_TAKRU
TSC complex subunit 1.
   
 0.883
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 0.864
phlpp1
PH domain and leucine rich repeat protein phosphatase 1.
    
 
 0.842
PHLPP2
PH domain and leucine rich repeat protein phosphatase 2.
    
 
 0.842
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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