Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
igf2rInsulin-like growth factor 2 receptor. (2366 aa)    
Predicted Functional Partners:
m6pr
Uncharacterized protein.
     
 0.998
igf2
Insulin-like growth factor 2b.
    
 
 0.962
vps26a
VPS26, retromer complex component A.
    
 
 0.929
gga3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.
    
 
 0.910
LOC101080215
Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.
    
 
 0.910
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 
 0.822
LOC101078557
Uncharacterized protein.
    
 
 0.822
LOC101074958
Uncharacterized protein.
    
 
 0.822
snx8
Sorting nexin 8a.
    
 0.819
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.817
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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