Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
iqcb1Uncharacterized protein. (614 aa)    
Predicted Functional Partners:
haus8
Si:ch211-153a8.4.
     
 0.889
ENSTRUP00000054618
Uncharacterized protein.
      
 0.881
m1ap
Meiosis 1 associated protein.
      
 0.881
gpr137c
G protein-coupled receptor 137c.
      
 0.810
hsf2bp
Heat shock transcription factor 2 binding protein.
      
 0.808
nphp1
Nephrocystin-1.
    
 0.791
LOC101067757
Ubiquitin specific peptidase 9; Belongs to the peptidase C19 family.
    
 
 0.782
exoc1
Exocyst complex component 1.
   
 0.782
CLSPN
Claspin.
      
 0.761
fancb
FA complementation group B.
      
 0.736
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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