STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gas8GAS domain-containing protein. (432 aa)    
Predicted Functional Partners:
p22phox
Cytochrome b-245 light chain; Critical component of the membrane-bound oxidase of phagocytes that generates superoxide. Associates with NOX3 to form a functional NADPH oxidase constitutively generating superoxide.
      
 0.648
coasy
CoA synthase.
    
 
 0.576
H2TXK8_TAKRU
NYD-SP28 domain-containing protein.
    
 
 0.550
mvd
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
      
 0.550
pdcd5
Programmed cell death 5.
      
 0.550
def8
Differentially expressed in FDCP 8 homolog.
      
 0.544
MTHFSD
Methenyltetrahydrofolate synthetase domain containing.
      
 0.542
dnali1
Dynein, axonemal, light intermediate chain 1.
  
 
 
 0.532
LOC101062929
Uncharacterized protein.
  
 
 
 0.528
LOC101073821
Uncharacterized protein.
  
 
 
 0.525
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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