STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
jmjd7Jumonji domain containing 7. (321 aa)    
Predicted Functional Partners:
drg1
Developmentally regulated GTP binding protein 1.
     
 0.703
zc3h15
Zinc finger CCCH-type containing 15.
   
 
 0.656
drg2
Developmentally regulated GTP binding protein 2.
   
 0.646
rwdd1
RWD domain containing 1.
     
 0.616
pla2g4a
Phospholipase A2.
     
 0.604
pla2g6
Phospholipase A2, group VI (cytosolic, calcium-independent).
     
 0.603
igf2
Insulin-like growth factor 2b.
     
  0.534
aamp
Angio-associated, migratory cell protein.
   
  
 0.521
cop1
COP1 E3 ubiquitin ligase.
      
 0.461
LOC101069591
PH_14 domain-containing protein.
      
 0.425
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.