Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101061169Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family. (629 aa)    
Predicted Functional Partners:
neu1
Neuraminidase 1.
  
 0.939
ctsa
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.869
LOC101077421
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.814
gla
Alpha-galactosidase.
  
  
 0.730
gm2a
ML domain-containing protein.
     
 0.697
LOC101065981
Sialidase 4.
     
 0.676
naga
Alpha-galactosidase.
  
  
 0.670
LOC101074738
Retinoblastoma binding protein 5.
    
 0.666
LOC101061441
CXXC finger protein 1b.
   
  0.649
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
  0.648
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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