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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101061169Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family. (629 aa)    
Predicted Functional Partners:
gla
Alpha-galactosidase.
  
 
 0.949
galns
Galactosamine (N-acetyl)-6-sulfatase.
   
 0.941
ENSTRUP00000085204
Aldose 1-epimerase isoform X1.
  
 
 0.926
ugcg
UDP-glucose ceramide glucosyltransferase.
   
 
 0.921
gns
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
  
 0.916
LOC101067840
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
  
 0.916
st3gal2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
   
 
 0.914
LCT
Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.912
gba2
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
     
 0.911
LOC101067520
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6.
     
 0.908
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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