STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lnpkbEndoplasmic reticulum junction formation protein lunapark-B; Endoplasmic reticulum (ER)-shaping membrane protein that plays a role in determining ER morphology. Involved in the stabilization of nascent three-way ER tubular junctions within the ER network. May also play a role as a curvature-stabilizing protein within three-way ER tubular junction network (By similarity). (439 aa)    
Predicted Functional Partners:
skap1
Src kinase-associated phosphoprotein 1; Positively regulates T-cell receptor signaling. Required for optimal conjugation between T-cells and antigen-presenting cells (By similarity); Belongs to the SKAP family.
      
 0.521
LOC101070735
Homeobox protein Hox-D4b; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family. Deformed subfamily.
      
 0.456
LOC101078224
Chromobox homolog 5 (HP1 alpha homolog, Drosophila).
      
 0.455
hoxd9b
Homeobox protein Hox-D9b; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Abd-B homeobox family.
      
 0.452
hoxd11b
Homeobox protein Hox-D11b; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Abd-B homeobox family.
      
 0.450
mtx2
Uncharacterized protein.
      
 0.448
hoxa1
Homeobox protein Hox-A1a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family. Labial subfamily.
      
 0.435
LOC101067226
Receptor expression-enhancing protein.
    
 
 0.414
LOC101075808
Receptor expression-enhancing protein.
    
 
 0.414
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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