STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2TF82_TAKRUUncharacterized protein. (309 aa)    
Predicted Functional Partners:
ENSTRUP00000083402
annotation not available
 
      0.644
ints4
Integrator complex subunit 4.
    
  0.504
nabp1
Nucleic acid binding protein 1a.
     
  0.500
ints12
Integrator complex subunit 12.
     
  0.500
ints11
Integrator complex subunit 11.
     
  0.500
ints7
Integrator complex subunit 7.
     
  0.500
ints10
Integrator complex subunit 10.
     
  0.500
ints8
Integrator complex subunit 8.
     
  0.500
LOC101069300
Integrator complex subunit 6 like.
     
  0.423
ints6
Integrator complex subunit 6.
     
  0.423
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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