STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mapk15Mitogen-activated protein kinase. (598 aa)    
Predicted Functional Partners:
LOC101066164
Chloride intracellular channel 3.
    
 
 0.762
ighmbp2
Immunoglobulin mu DNA binding protein 2.
      
 0.718
LOC101069329
KAT8 regulatory NSL complex subunit 3.
      
 0.716
cdc25b
Cell division cycle 25B.
    
 0.705
pea15
Proliferation and apoptosis adaptor protein 15.
    
 0.678
clic2
Chloride intracellular channel protein; Belongs to the chloride channel CLIC family.
    
 
 0.641
mecp2
Methyl CpG binding protein 2.
   
 
 0.640
pla2g4a
Phospholipase A2.
    
 0.636
MAP2K6
Mitogen-activated protein kinase kinase 6; Belongs to the protein kinase superfamily.
   
 0.631
LOC101064673
Mitogen-activated protein kinase kinase 6.
   
 0.631
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.