enkur protein (Takifugu rubripes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

enkur

Enkurin, TRPC channel interacting protein. (255 aa)

Predicted Functional Partners:

adsl

0.663

LOC101074513

0.637

atp5f1c

0.595

cfap52

0.588

pacrg

0.586

atp5po

0.575

cfap45

0.572

atp5f1a

0.561

wdr90

0.512

tekt2

0.497

Your Current Organism:

Takifugu rubripes

NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101074513	cfap45	ENSTRUP00000085446	ENSTRUP00000000937	EF-hand domain (C-terminal) containing 1.	Cilia and flagella associated protein 45.	0.839
LOC101074513	cfap52	ENSTRUP00000085446	ENSTRUP00000068898	EF-hand domain (C-terminal) containing 1.	Cilia and flagella associated protein 52.	0.867
LOC101074513	enkur	ENSTRUP00000085446	ENSTRUP00000023347	EF-hand domain (C-terminal) containing 1.	Enkurin, TRPC channel interacting protein.	0.637
LOC101074513	pacrg	ENSTRUP00000085446	ENSTRUP00000030792	EF-hand domain (C-terminal) containing 1.	PARK2 co-regulated.	0.966
LOC101074513	tekt2	ENSTRUP00000085446	ENSTRUP00000032613	EF-hand domain (C-terminal) containing 1.	Tektin 2 (testicular).	0.819
LOC101074513	wdr90	ENSTRUP00000085446	ENSTRUP00000084844	EF-hand domain (C-terminal) containing 1.	WD repeat domain 90.	0.988
adsl	atp5f1a	ENSTRUP00000048596	ENSTRUP00000049626	Adenylosuccinate lyase.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.474
adsl	enkur	ENSTRUP00000048596	ENSTRUP00000023347	Adenylosuccinate lyase.	Enkurin, TRPC channel interacting protein.	0.663
atp5f1a	adsl	ENSTRUP00000049626	ENSTRUP00000048596	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Adenylosuccinate lyase.	0.474
atp5f1a	atp5f1c	ENSTRUP00000049626	ENSTRUP00000026723	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit gamma.	0.999
atp5f1a	atp5po	ENSTRUP00000049626	ENSTRUP00000069814	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase peripheral stalk subunit OSCP.	0.999
atp5f1a	enkur	ENSTRUP00000049626	ENSTRUP00000023347	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Enkurin, TRPC channel interacting protein.	0.561
atp5f1c	atp5f1a	ENSTRUP00000026723	ENSTRUP00000049626	ATP synthase subunit gamma.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
atp5f1c	atp5po	ENSTRUP00000026723	ENSTRUP00000069814	ATP synthase subunit gamma.	ATP synthase peripheral stalk subunit OSCP.	0.999
atp5f1c	enkur	ENSTRUP00000026723	ENSTRUP00000023347	ATP synthase subunit gamma.	Enkurin, TRPC channel interacting protein.	0.595
atp5po	atp5f1a	ENSTRUP00000069814	ENSTRUP00000049626	ATP synthase peripheral stalk subunit OSCP.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
atp5po	atp5f1c	ENSTRUP00000069814	ENSTRUP00000026723	ATP synthase peripheral stalk subunit OSCP.	ATP synthase subunit gamma.	0.999
atp5po	enkur	ENSTRUP00000069814	ENSTRUP00000023347	ATP synthase peripheral stalk subunit OSCP.	Enkurin, TRPC channel interacting protein.	0.575
cfap45	LOC101074513	ENSTRUP00000000937	ENSTRUP00000085446	Cilia and flagella associated protein 45.	EF-hand domain (C-terminal) containing 1.	0.839
cfap45	cfap52	ENSTRUP00000000937	ENSTRUP00000068898	Cilia and flagella associated protein 45.	Cilia and flagella associated protein 52.	0.867