STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mapre3Microtubule-associated protein, RP/EB family, member 3a. (274 aa)    
Predicted Functional Partners:
ckap5
Cytoskeleton associated protein 5.
   
 
 0.787
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.786
cenpe
Centromere-associated protein E isoform X4.
   
 
 0.709
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 0.682
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.670
LOC101076892
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.670
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.649
bub3
BUB3 mitotic checkpoint protein.
   
 0.639
ENSTRUP00000069941
annotation not available
   
 0.639
dctn2
Dynactin 2 (p50).
    
 
 0.607
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.