Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101075621Extended synaptotagmin-like protein 1b. (1828 aa)    
Predicted Functional Partners:
speg
Striated muscle preferentially expressed protein kinase isoform X1.
     
 0.711
LOC101077597
Platelet endothelial aggregation receptor 1-like.
      
 0.706
sharpin
SHANK-associated RH domain interacting protein.
    
 
 0.706
ENSTRUP00000071475
Bassoon (presynaptic cytomatrix protein) b.
     
 0.556
derl2
Derlin-2/3.
    
 
 0.517
LOC101064651
Tetraspanin.
    
 
 0.513
faf2
Fas associated factor family member 2.
    
   0.508
LOC101075302
Ras homolog family member F.
    
  0.500
exoc1
Exocyst complex component 1.
   
 
 0.470
LOC101076287
Ras homolog gene family, member Gd.
    
  0.459
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.