Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
abcc2ATP-binding cassette, sub-family C (CFTR/MRP), member 2. (1562 aa)    
Predicted Functional Partners:
nup210
Nucleoporin 210.
   
  
 0.833
LOC101072243
ABC transporter domain-containing protein.
  
 0.801
LOC101068857
ATP-binding cassette, sub-family G (WHITE), member 2b.
  
 0.801
abcg2
ATP-binding cassette, sub-family G (WHITE), member 2d.
  
 0.801
pdzk1
PDZ domain containing 1.
   
 0.800
golph3
Si:dkey-27b3.2.
    
 
 0.735
ktn1
Kinectin 1.
   
   0.729
abca12
ATP-binding cassette, sub-family A (ABC1), member 12.
  
 0.684
SLC10A1
Solute carrier family 10 member 1.
   
  
 0.666
gopc
Golgi-associated PDZ and coiled-coil motif-containing protein isoform X1.
    
 0.602
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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