Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
cap1Adenylyl cyclase-associated protein; Belongs to the CAP family. (463 aa)    
Predicted Functional Partners:
WDR1
WD repeat domain 1.
   
 
 0.875
LOC101073001
Twinfilin actin-binding protein 1a.
   
 
 0.857
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 
 0.750
cfl2
Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family.
   
 0.749
cfl1
Cofilin 1; Belongs to the actin-binding proteins ADF family.
   
 0.749
grxcr1
Glutaredoxin and cysteine rich domain containing 1 a.
    
   0.747
dstn
ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.
   
 0.745
lcp1
Uncharacterized protein.
   
 
 0.720
PLS3
Plastin 3.
   
 
 0.720
LOC101074405
Drebrin-like a.
   
 
 0.717
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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