STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps28Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (228 aa)    
Predicted Functional Partners:
vps37b
Zgc:114173.
   
 0.995
vps36
Vacuolar protein sorting 36 homolog.
    
 0.992
ENSTRUP00000034070
annotation not available
   
 0.990
vps25
Vacuolar protein sorting 25 homolog.
   
 0.987
mvb12b
Multivesicular body subunit 12Ba.
   
 0.986
LOC101068384
Tumor susceptibility gene 101 protein-like.
   
 0.978
LOC101079670
Tumor susceptibility 101a.
   
 0.978
vps37a
VPS37A subunit of ESCRT-I.
   
 0.972
LOC101078992
UEV domain-containing protein.
   
 0.966
LOC101064065
VPS37C subunit of ESCRT-I.
   
 0.959
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.