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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
utp11U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (254 aa)    
Predicted Functional Partners:
wdr46
WD repeat domain 46.
   
 0.999
utp3
UTP3 small subunit processome component.
   
 0.999
fcf1
FCF1 rRNA-processing protein.
   
 0.998
noc4l
Nucleolar complex associated 4 homolog.
   
 0.998
nop14
NOP14 nucleolar protein homolog (yeast).
   
 0.998
dcaf13
Ddb1 and cul4 associated factor 13.
   
  0.997
LOC101072761
UTP14C small subunit processome component.
   
 0.997
ngdn
Neuroguidin, EIF4E binding protein.
   
 0.997
utp20
UTP20 small subunit processome component.
   
 0.996
utp18
UTP18 small subunit processome component.
   
 0.996
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.