Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101061481Even-skipped-like1. (244 aa)    
Predicted Functional Partners:
LOC101072629
Peptidylprolyl isomerase.
      
 0.659
chrd
Chordin.
      
 0.605
LOC101072541
Homeobox protein Hox-B8a; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family.
   
 
0.533
LOC101063135
Peptidylprolyl isomerase.
      
 0.487
unc5a
Unc-5 netrin receptor A.
    
 
 0.486
shh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
      
 0.476
LOC101077064
T-box transcription factor 16.
    
 
 0.474
LOC101067138
Goosecoid.
   
 
 0.473
kcnh8
Potassium voltage-gated channel, subfamily H (eag-related), member 8.
      
 0.472
LOC101066263
Potassium channel, subfamily K, member 5b; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
   
  
 0.442
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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