STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101066924PNKD metallo-beta-lactamase domain containing. (361 aa)    
Predicted Functional Partners:
ENSTRUP00000057607
Proline-rich transmembrane protein 2.
    
 
 0.697
H2SE12_TAKRU
Uncharacterized protein.
    
 
 0.633
pet100
PET100 cytochrome c oxidase chaperone.
   
 
 0.599
tmem25
Ig-like domain-containing protein.
      
 0.591
Ldhd
Probable D-lactate dehydrogenase, mitochondrial.
    
 0.554
ENSTRUP00000059646
Uncharacterized protein.
      
 0.552
SLC35D3
Solute carrier family 35 member D3.
      
 0.519
glod4
Si:ch211-259g3.4.
  
 0.516
catip
Uncharacterized protein.
      
 0.507
GLO1
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
  
 0.503
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.