Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc23a1Solute carrier family 23 member 1. (600 aa)    
Predicted Functional Partners:
LOC101076958
Zgc:110789.
  
  
 
0.903
LOC101070059
Si:dkey-106n21.1.
  
  
 
0.903
sil1
SIL1 nucleotide exchange factor.
      
 0.694
umps
Uridine monophosphate synthetase.
  
  
 0.607
slc33a1
Solute carrier family 33 member 1.
   
  
 0.579
LOC101075901
Golgi transport 1Bb.
  
  
 0.571
golt1b
Golgi transport 1Ba.
  
  
 0.571
dhodh
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
  
 0.536
dpyd
Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.
  
  
 0.536
LOC101068562
Solute carrier family 7 member 6.
      
 0.520
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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