Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101079524SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b. (923 aa)    
Predicted Functional Partners:
smarcc2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.
  
  
 
0.941
brd9
Bromodomain containing 9.
   
 0.926
LOC101068543
Polybromo 1, like.
   
 0.925
LOC101080222
Polybromo 1.
   
 0.925
LOC101063536
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.
   
 0.925
smarca4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a.
   
 0.925
SMARCE1
HMG box domain-containing protein.
   
 0.919
brd7
Bromodomain containing 7.
   
 0.919
LOC101066868
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
   
 0.919
phf10
PHD finger protein 10.
    
 0.918
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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