fit to screen
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101061582Centrin, EF-hand protein, 2. (171 aa)    
Predicted Functional Partners:
xpc
Xeroderma pigmentosum, complementation group C.
    
 0.941
sfi1
Protein SFI1 homolog isoform X1.
    
 0.932
poc5
POC5 centriolar protein homolog (Chlamydomonas).
    
 
 0.902
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 0.869
LOC105417636
Uncharacterized protein LOC105417636.
    
 0.866
ercc3
Excision repair cross-complementation group 3.
    
 0.856
rad23a
RAD23 homolog A, nucleotide excision repair protein a.
   
 0.849
cetn3
Centrin 3.
  
 
0.827
cep164
Uncharacterized protein.
    
 0.825
xpa
XPA_C domain-containing protein.
    
 0.821
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (18%) [HD]