STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101071623C2 domain-containing protein. (428 aa)    
Predicted Functional Partners:
LOC101077791
Uncharacterized protein.
     
 0.544
itsn1
Intersectin 1 (SH3 domain protein).
     
 0.473
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.469
LOC101072026
Cytochrome b5 reductase 4.
   
 
 0.453
gatad2b
GATA zinc finger domain containing 2B.
      
 0.426
kbtbd2
Kelch repeat and BTB (POZ) domain containing 2.
      
 0.426
LOC101076374
Importin 13.
      
 0.426
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.