STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101071293Ubiquitin-like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family. (1037 aa)    
Predicted Functional Partners:
birc6
Baculoviral IAP repeat containing 6.
  
 0.929
UBA6
Ubiquitin like modifier activating enzyme 6.
  
  
 
0.910
uba1
Ubiquitin-like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
  
  
0.906
ube2z
Ubiquitin-conjugating enzyme E2Z.
  
 0.891
rps27a
Ribosomal protein S27a.
   
 0.888
ube2w
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.884
ube2c
Uncharacterized protein.
   
 0.884
ENSTRUP00000085001
annotation not available
  
 0.881
ube2s
Ubiquitin-conjugating enzyme E2S; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.879
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.874
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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