Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ECM2Extracellular matrix protein 2. (686 aa)    
Predicted Functional Partners:
dpt
Dermatopontin.
   
  
 0.596
LOC101072798
Si:zfos-323e3.4.
  
     0.485
yrdc
YrdC N(6)-threonylcarbamoyltransferase domain containing.
      
 0.477
lrrc28
Leucine rich repeat containing 28.
  
 
  0.475
Lrrc10b
Uncharacterized protein.
  
     0.473
LOC101074018
Leucine rich repeat containing 18b.
  
     0.472
LOC101075579
Osteoglycin, paralog b.
   
  
 0.472
LOC101080150
Osteoglycin, paralog a.
   
  
 0.472
ENSTRUP00000086666
Osteoglycin, paralog a.
   
  
 0.472
H2TC77_TAKRU
Uncharacterized protein.
  
     0.471
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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