STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEM1AFem-1 homolog A. (617 aa)    
Predicted Functional Partners:
cul2
Cullin 2; Belongs to the cullin family.
    
 0.859
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.749
ubxn7
UBX domain protein 7.
    
 0.642
UBXN7
UBX domain protein 7.
    
 0.642
LOC115248454
RING-box protein 1.
    
 0.612
LOC101079814
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.612
ppm1e
Protein phosphatase, Mg2+/Mn2+ dependent, 1E.
   
 
 0.593
LOC101070508
Elongin-B isoform X1.
    
 0.590
LOC101068670
Ubiquitin-like domain-containing protein.
    
 0.590
cand1
Cullin-associated and neddylation-dissociated 1.
   
 
 0.573
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: low (22%) [HD]