STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101073972Annexin. (385 aa)    
Predicted Functional Partners:
tfg
Trafficking from ER to golgi regulator.
   
  0.544
ppp2cb
Serine/threonine-protein phosphatase.
   
 
 0.525
LOC101070744
Grancalcin.
   
 
 0.466
LOC101066788
Uncharacterized protein.
   
 
 0.466
stxbp2
Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.459
LOC101066073
Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.459
LOC101061698
Syntaxin-binding protein 1-like.
    
 0.459
pef1
Penta-EF-hand domain containing 1.
   
 
 0.435
pdcd6
Programmed cell death 6.
   
 
 0.435
wdr90
WD repeat domain 90.
   
 
 0.434
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.