Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
farsbPhenylalanyl-tRNA synthetase subunit beta; Belongs to the EF-1-beta/EF-1-delta family. (844 aa)    
Predicted Functional Partners:
LOC101067462
Phenylalanyl-tRNA synthetase subunit alpha.
  
 0.999
fars2
Phenylalanyl-tRNA synthetase 2, mitochondrial.
  
 0.995
eprs1
Glutamyl-prolyl-tRNA synthetase.
  
 
 0.973
iars1
Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.943
fdxacb1
Ferredoxin-fold anticodon binding domain containing 1.
  
 0.941
yars1
Tyrosine--tRNA ligase.
  
  
 0.919
eif2s3
Eukaryotic translation initiation factor 2, subunit 3 gamma.
  
  
 0.895
tmco1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
 
      0.887
SGPP2
Sphingosine-1-phosphate phosphatase 2.
     
 0.866
kars1
Lysine--tRNA ligase.
  
  
 0.833
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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