Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fhl3Four and a half LIM domains 3a. (282 aa)    
Predicted Functional Partners:
dnal4
Dynein light chain.
    
   0.608
Sowahd
Sosondowah ankyrin repeat domain family d.
    
 0.582
LOC101069813
Transmembrane protein 151Bb.
      
 0.545
ENSTRUP00000056688
Transmembrane protein 119b.
   
  
 0.545
LOC101078369
Mannosidase, endo-alpha.
    
 
 0.523
arhgap45
Rho GTPase activating protein 45b.
   
 0.517
NRGN
Neurogranin.
      
 0.497
ENSTRUP00000086599
GCM domain-containing protein.
   
   0.494
H2SN35_TAKRU
Rho GTPase activating protein 27.
    
 0.490
aimp2
Aminoacyl tRNA synthetase complex interacting multifunctional protein 2.
    
   0.476
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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