Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sarnpSAP domain-containing protein. (210 aa)    
Predicted Functional Partners:
LOC101070020
Zinc finger CCCH-type containing 11A.
    
 0.988
thoc7
THO complex 7.
   
 0.980
thoc1
THO complex 1.
    
 0.978
poldip3
Polymerase (DNA-directed), delta interacting protein 3.
   
 0.970
thoc2
THO complex 2.
   
 0.957
chtop
Chromatin target of PRMT1a.
   
 0.951
ALYREF
Aly/REF export factor.
   
 0.951
thoc3
THO complex 3.
    
 0.950
LOC101064597
Uncharacterized protein.
   
 0.928
LOC101075541
Uncharacterized protein.
   
 0.928
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.