Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H2U447_TAKRU | LOC101074032 | ENSTRUP00000031709 | ENSTRUP00000023884 | Vav 3 guanine nucleotide exchange factor b. | Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a. | 0.668 |
LOC101071528 | LOC101072985 | ENSTRUP00000025241 | ENSTRUP00000070532 | Macrophage stimulating 1 receptor a. | Uncharacterized protein. | 0.816 |
LOC101071528 | LOC101074032 | ENSTRUP00000025241 | ENSTRUP00000023884 | Macrophage stimulating 1 receptor a. | Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a. | 0.679 |
LOC101071528 | PTK7 | ENSTRUP00000025241 | ENSTRUP00000044888 | Macrophage stimulating 1 receptor a. | Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.690 |
LOC101071528 | habp2 | ENSTRUP00000025241 | ENSTRUP00000032811 | Macrophage stimulating 1 receptor a. | Hyaluronan binding protein 2. | 0.816 |
LOC101071528 | hgfac | ENSTRUP00000025241 | ENSTRUP00000025736 | Macrophage stimulating 1 receptor a. | HGF activator. | 0.833 |
LOC101071528 | met | ENSTRUP00000025241 | ENSTRUP00000078415 | Macrophage stimulating 1 receptor a. | Uncharacterized protein. | 0.677 |
LOC101071528 | mst1r | ENSTRUP00000025241 | ENSTRUP00000035729 | Macrophage stimulating 1 receptor a. | Macrophage stimulating 1 receptor b. | 0.683 |
LOC101071528 | ripk4 | ENSTRUP00000025241 | ENSTRUP00000004326 | Macrophage stimulating 1 receptor a. | Receptor-interacting serine-threonine kinase 4. | 0.490 |
LOC101072985 | LOC101071528 | ENSTRUP00000070532 | ENSTRUP00000025241 | Uncharacterized protein. | Macrophage stimulating 1 receptor a. | 0.816 |
LOC101072985 | LOC101074032 | ENSTRUP00000070532 | ENSTRUP00000023884 | Uncharacterized protein. | Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a. | 0.683 |
LOC101072985 | PTK7 | ENSTRUP00000070532 | ENSTRUP00000044888 | Uncharacterized protein. | Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.808 |
LOC101072985 | habp2 | ENSTRUP00000070532 | ENSTRUP00000032811 | Uncharacterized protein. | Hyaluronan binding protein 2. | 0.562 |
LOC101072985 | hgfac | ENSTRUP00000070532 | ENSTRUP00000025736 | Uncharacterized protein. | HGF activator. | 0.449 |
LOC101072985 | met | ENSTRUP00000070532 | ENSTRUP00000078415 | Uncharacterized protein. | Uncharacterized protein. | 0.816 |
LOC101072985 | mst1r | ENSTRUP00000070532 | ENSTRUP00000035729 | Uncharacterized protein. | Macrophage stimulating 1 receptor b. | 0.816 |
LOC101072985 | ripk4 | ENSTRUP00000070532 | ENSTRUP00000004326 | Uncharacterized protein. | Receptor-interacting serine-threonine kinase 4. | 0.739 |
LOC101074032 | H2U447_TAKRU | ENSTRUP00000023884 | ENSTRUP00000031709 | Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a. | Vav 3 guanine nucleotide exchange factor b. | 0.668 |
LOC101074032 | LOC101071528 | ENSTRUP00000023884 | ENSTRUP00000025241 | Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a. | Macrophage stimulating 1 receptor a. | 0.679 |
LOC101074032 | LOC101072985 | ENSTRUP00000023884 | ENSTRUP00000070532 | Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a. | Uncharacterized protein. | 0.683 |
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