STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101077966Nuclear receptor coactivator 3. (1526 aa)    
Predicted Functional Partners:
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
    
 0.804
LOC101073984
CREB binding protein a.
   
 0.770
LOC101073582
Nuclear receptor subfamily 1, group H, member 5.
    
 0.742
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
    
 0.742
LOC101063381
Vitamin D receptor b.
    
 0.714
LOC101075951
Uncharacterized protein.
    
 0.714
LOC101067852
Uncharacterized protein.
    
 0.710
LOC101064914
Retinoid x receptor, beta b.
   
 0.709
LOC101079168
Uncharacterized protein.
   
 0.709
RXRB
Uncharacterized protein.
   
 0.709
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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