Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rilpl2Rab interacting lysosomal protein-like 2. (223 aa)    
Predicted Functional Partners:
rab10
RAB10, member RAS oncogene family.
   
 
 0.782
LOC101064738
Uncharacterized protein.
   
 
 0.736
LOC101063247
RAB8A, member RAS oncogene family.
   
 
 0.736
LOC101062021
Multiple EGF-like-domains 8.
   
 
 0.736
RAB8A
RAB8A, member RAS oncogene family.
   
 
 0.736
LOC101062229
RAB15, member RAS oncogene family.
   
 
 0.733
rab15
RAB15, member RAS oncogene family.
   
 
 0.733
rab13
RAB13, member RAS oncogene family.
   
 
 0.733
rab35
RAB35, member RAS oncogene family b.
      
 0.654
LOC101066302
Si:dkey-16l2.16.
      
 0.654
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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