Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
virmaVir like m6A methyltransferase associated. (1798 aa)    
Predicted Functional Partners:
Zc3h13
Uncharacterized protein.
   
 
 0.994
wtap
WT1 associated protein.
    
 
 0.993
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
    
 0.978
cbll1
Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase.
    
 0.977
mettl3
Methyltransferase like 3; Belongs to the MT-A70-like family.
    
 0.973
rbm15
RNA binding motif protein 15.
   
 
 0.955
ALYREF
Aly/REF export factor.
    
 
 0.925
ENSTRUP00000082838
SPOC domain-containing protein.
   
 
 0.858
thoc2
THO complex 2.
   
 
 0.852
H2T4D8_TAKRU
RNA binding motif protein 15.
   
 
 0.813
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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