Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
nr5a2Nuclear receptor subfamily 5, group A, member 2. (549 aa)    
Predicted Functional Partners:
NR0B1
Nuclear receptor subfamily 0 group B member 1.
    
0.852
LOC101061639
NR LBD domain-containing protein.
    
 0.829
LOC101061424
Nuclear receptor subfamily 0, group B, member 2b.
   
 0.800
LOC101074042
Nuclear receptor subfamily 0, group B, member 2a.
   
 0.800
LOC101069469
Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.
   
 
 0.794
ppargc1a
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1.
    
 
 0.782
nkx6-1
NK6 homeobox 1.
      
 0.778
amh
TGF_BETA_2 domain-containing protein.
    
 0.716
ncoa1
Nuclear receptor coactivator 1.
    
 0.706
LOC101077966
Nuclear receptor coactivator 3.
    
 0.706
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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