STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gdpd2Glycerophosphodiester phosphodiesterase domain containing 2. (547 aa)    
Predicted Functional Partners:
LOC101062218
Glycerol-3-phosphate dehydrogenase 2 (mitochondrial).
  
 0.698
lrp3
Low density lipoprotein receptor-related protein 3.
      
 0.560
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
  
 
 0.469
LOC105418711
Si:ch1073-145m9.1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.469
ISYNA1
Inositol-3-phosphate synthase 1.
     
  0.451
KATNAL2
Katanin catalytic subunit A1 like 2; Belongs to the AAA ATPase family.
  
 
 0.435
ENSTRUP00000070399
Katanin p60 ATPase-containing subunit A-like 2 isoform X1.
  
 
 0.435
shpk
Sedoheptulokinase.
  
 
 0.412
atad2b
ATPase family AAA domain containing 2B.
  
 
 0.412
katna1
Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.
  
 
 0.412
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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