STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
micall1MICAL-like 1a. (898 aa)    
Predicted Functional Partners:
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
  0.574
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.556
LOC101077791
Uncharacterized protein.
   
 
 0.551
rab12
RAB12, member RAS oncogene family.
    
 0.470
H2UZP7_TAKRU
Parvin, gamma.
     
 0.469
LOC101075233
Parvin, alpha a.
     
 0.469
ENSTRUP00000069460
annotation not available
     
 0.469
MYOZ1
Myozenin 1.
   
 
 0.460
TPM4
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.454
LOC101070032
Uncharacterized protein.
   
 0.454
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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