Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gxylt2Uncharacterized protein. (442 aa)    
Predicted Functional Partners:
GXYLT1
Glucoside xylosyltransferase 1.
  
  
 
0.903
gxylt1
Glucoside xylosyltransferase 1b.
  
  
 
0.902
shq1
SHQ1, H/ACA ribonucleoprotein assembly factor.
      
 0.718
arl15
ADP-ribosylation factor-like 15a.
      
 0.715
poglut1
Protein O-glucosyltransferase 1.
      
 0.585
EIF4E3
Eukaryotic translation initiation factor 4E family member 3; Belongs to the eukaryotic initiation factor 4E family.
      
 0.567
LOC101063498
Eukaryotic translation initiation factor 4E family member 3; Belongs to the eukaryotic initiation factor 4E family.
      
 0.567
uggt2
UDP-glucose glycoprotein glucosyltransferase 2.
   
  
 0.535
uggt1
UDP-glucose glycoprotein glucosyltransferase 1.
   
  
 0.535
LOC101063274
Uncharacterized protein.
   
  
 0.533
Your Current Organism:
Takifugu rubripes
NCBI taxonomy Id: 31033
Other names: Fugu rubripes, Sphaeroides rubripes, T. rubripes, Tetraodon rubripes, tiger puffer, torafugu
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